Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces roseus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces roseus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces roseus
NCBI Strain Identifiers ATCC 31245
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 1.6%
CheckM Strain Heterogeneity 18.18
5S Count 0
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 234
N50 Contigs 66,555 bp
Longest Contig 152,056 bp
Scaffold Count 163
N50 Scaffolds 95,271 bp
Longest Scaffold 310,342 bp
Genome Size 7,834,742 bp
Protein Count 7,088
Coding Density 87.74%
GC Percentage 72.34%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM104442v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03787768
Country None
Date 2015-07-01
Genbank Assembly Accession GCA_001044425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,111
Refseq Category na
Seq Rel Date 2015/07/01
Spanned Gaps 71
Species Taxid 66430
SSU Count 1
Submitter Langebio genomic services unit
Taxid 66430
Total Gap Length 21517
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFML00000000.1