Mycobacterium chlorophenolicum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium chlorophenolicum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium chlorophenolicum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycolicibacterium; s__Mycolicibacterium chlorophenolicum
NCBI Strain Identifiers DSM 43826
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.12%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 73
N50 Contigs 353,239 bp
Longest Contig 1,135,545 bp
Scaffold Count 72
N50 Scaffolds 438,634 bp
Longest Scaffold 1,135,545 bp
Genome Size 7,379,520 bp
Protein Count 7,171
Coding Density 90.75%
GC Percentage 68.43%
Ambiguous Bases 191
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM104423v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03327461
Country None
Date 2015-07-01
Genbank Assembly Accession GCA_001044235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 7,129
Refseq Category representative genome
Seq Rel Date 2015/07/01
Spanned Gaps 1
Species Taxid 37916
SSU Count 2
Submitter Uppsala University
Taxid 37916
Total Gap Length 44
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JYNL00000000.1