Methylobacterium tarhaniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium tarhaniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium tarhaniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium tarhaniae
NCBI Strain Identifiers DSM 25844
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 95.19%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 483
N50 Contigs 35,164 bp
Longest Contig 152,471 bp
Scaffold Count 483
N50 Scaffolds 35,164 bp
Longest Scaffold 152,471 bp
Genome Size 6,743,422 bp
Protein Count 6,348
Coding Density 85.23%
GC Percentage 70.43%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM104395v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03406606
Country Nigeria:Abuja
Date 2015-6-30
Genbank Assembly Accession GCA_001043955.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Arid soil
Latitude Longitude None
Molecule Count N/A
CDS Count 6,214
Refseq Category na
Seq Rel Date 2015/06/30
Spanned Gaps 0
Species Taxid 1187852
SSU Count 5
Submitter CSIR-Institute of Microbial Technology
Taxid 1187852
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LABZ00000000.1