Undefined name (Failed Quality Check)
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus sp. LL01
NCBI Strain Identifiers LL01
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.25%
CheckM Contamination 55.98%
CheckM Strain Heterogeneity 18.92
5S Count 13
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 290
N50 Contigs 497,957 bp
Longest Contig 1,286,564 bp
Scaffold Count 290
N50 Scaffolds 497,957 bp
Longest Scaffold 1,286,564 bp
Genome Size 5,802,366 bp
Protein Count 6,044
Coding Density 85.14%
GC Percentage 41.16%
Ambiguous Bases 1,487
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Bacillus_LL01_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03765409
Country Chile: Atacama Desert
Date 2015-06-22
Genbank Assembly Accession GCA_001037965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source complex microbiota associated with Nostoc cyanobacterium colonies collected from wetlands above 3;000 m altitude in Andes Mountain Range in North Chile
Latitude Longitude None
Molecule Count N/A
CDS Count 5,851
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 0
Species Taxid 1665556
SSU Count 10
Submitter University of North Texas
Taxid 1665556
Total Gap Length 0
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFEL00000000.1