Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Chromobacteriaceae; g__Vogesella; s__Vogesella indigofera
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Vogesella; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Vogesella; s__Vogesella sp. EB
NCBI Strain Identifiers EB
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003633895.1)
Genome Characteristics
CheckM Completeness 98.29%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 75
N50 Contigs 110,471 bp
Longest Contig 308,494 bp
Scaffold Count 75
N50 Scaffolds 110,471 bp
Longest Scaffold 308,494 bp
Genome Size 3,540,164 bp
Protein Count 3,347
Coding Density 88.66%
GC Percentage 64.37%
Ambiguous Bases 1
GTDB representative GCA_003633895.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name VogEB1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03770809
Country Argentina: Andean Patagonia; Rio Negro; El Bolson Villages
Date 2015-6-22
Genbank Assembly Accession GCA_001037925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Pond water with small depth; with [Fe] =3;8 mg/L; oily sheens similar to an oil spill and Reddish-deposits of iron hydroxides are frequently observed in the water.
Latitude Longitude 41.96 S 71.51 W
Molecule Count N/A
CDS Count 3,322
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 0
Species Taxid 1526735
SSU Count 1
Submitter INDEAR
Taxid 1526735
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFDT00000000.1