Citrobacter portucalensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter portucalensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter sp. MGH110
NCBI Strain Identifiers MGH110
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002042885.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 4
tRNA Count 19
Contig Count 13
N50 Contigs 820,991 bp
Longest Contig 1,407,478 bp
Scaffold Count 7
N50 Scaffolds 3,458,368 bp
Longest Scaffold 3,458,368 bp
Genome Size 5,005,078 bp
Protein Count 4,639
Coding Density 88.66%
GC Percentage 51.95%
Ambiguous Bases N/A
GTDB representative GCA_002042885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Citr_freu_complex_MGH110_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280168
Country None
Date 2015-6-22
Genbank Assembly Accession GCA_001037515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,791
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 6
Species Taxid 1686383
SSU Count 6
Submitter Broad Institute
Taxid 1686383
Total Gap Length 8087
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LESS00000000.1