Citrobacter freundii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter sp. MGH103
NCBI Strain Identifiers MGH103
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900635425.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 4
23S Count 3
tRNA Count 19
Contig Count 15
N50 Contigs 865,359 bp
Longest Contig 1,205,082 bp
Scaffold Count 9
N50 Scaffolds 1,934,712 bp
Longest Scaffold 2,620,279 bp
Genome Size 5,396,670 bp
Protein Count 5,159
Coding Density 88.44%
GC Percentage 51.80%
Ambiguous Bases N/A
GTDB representative GCA_900635425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Citr_freu_complex_MGH103_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280163
Country None
Date 2015-06-22
Genbank Assembly Accession GCA_001034475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,410
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 6
Species Taxid 1686378
SSU Count 4
Submitter Broad Institute
Taxid 1686378
Total Gap Length 12483
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LESN00000000.1