Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers UCI93
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 7
23S Count 6
tRNA Count 19
Contig Count 32
N50 Contigs 545,192 bp
Longest Contig 1,003,304 bp
Scaffold Count 16
N50 Scaffolds 3,828,760 bp
Longest Scaffold 3,828,760 bp
Genome Size 5,598,904 bp
Protein Count 5,300
Coding Density 87.54%
GC Percentage 57.22%
Ambiguous Bases 1
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_UCI93_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280428
Country None
Date 2015-06-22
Genbank Assembly Accession GCA_001034295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,644
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 16
Species Taxid 573
SSU Count 8
Submitter Broad Institute
Taxid 573
Total Gap Length 21876
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFBN00000000.1