Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers CHS163
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 8
23S Count 6
tRNA Count 20
Contig Count 51
N50 Contigs 489,563 bp
Longest Contig 1,097,777 bp
Scaffold Count 13
N50 Scaffolds 3,147,520 bp
Longest Scaffold 3,147,520 bp
Genome Size 5,924,443 bp
Protein Count 5,550
Coding Density 86.56%
GC Percentage 56.96%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS163_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280304
Country USA
Date 2015-06-22
Genbank Assembly Accession GCA_001032195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,913
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 38
Species Taxid 573
SSU Count 4
Submitter Broad Institute
Taxid 573
Total Gap Length 88101
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEXN00000000.1