Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers CHS117
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 6
23S Count 6
tRNA Count 18
Contig Count 44
N50 Contigs 365,022 bp
Longest Contig 841,855 bp
Scaffold Count 13
N50 Scaffolds 1,557,251 bp
Longest Scaffold 1,652,250 bp
Genome Size 5,896,200 bp
Protein Count 5,542
Coding Density 86.98%
GC Percentage 56.97%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS117_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280260
Country USA
Date 2015-06-22
Genbank Assembly Accession GCA_001031415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,917
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 31
Species Taxid 573
SSU Count 6
Submitter Broad Institute
Taxid 573
Total Gap Length 62187
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEWA00000000.1