Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers CHS106
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 25
N50 Contigs 718,901 bp
Longest Contig 1,326,569 bp
Scaffold Count 10
N50 Scaffolds 1,974,913 bp
Longest Scaffold 2,551,285 bp
Genome Size 5,836,506 bp
Protein Count 5,484
Coding Density 87.27%
GC Percentage 57.01%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS106_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280249
Country USA
Date 2015-06-22
Genbank Assembly Accession GCA_001031235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,853
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 15
Species Taxid 573
SSU Count 6
Submitter Broad Institute
Taxid 573
Total Gap Length 17933
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEVQ00000000.1