Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers CHS99
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 98.51%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 5
23S Count 6
tRNA Count 20
Contig Count 38
N50 Contigs 434,480 bp
Longest Contig 1,278,983 bp
Scaffold Count 9
N50 Scaffolds 2,918,083 bp
Longest Scaffold 2,918,083 bp
Genome Size 5,770,702 bp
Protein Count 5,428
Coding Density 87.15%
GC Percentage 56.94%
Ambiguous Bases 4
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS99_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280242
Country USA
Date 2015-06-22
Genbank Assembly Accession GCA_001031105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,791
Refseq Category na
Seq Rel Date 2015/06/22
Spanned Gaps 29
Species Taxid 573
SSU Count 3
Submitter Broad Institute
Taxid 573
Total Gap Length 46155
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEVK00000000.1