Bacillus altitudinis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus altitudinis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus altitudinis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; x__Bacillus altitudinis complex; s__Bacillus altitudinis
NCBI Strain Identifiers RIT380
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000691145.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 85
N50 Contigs 98,293 bp
Longest Contig 236,176 bp
Scaffold Count 85
N50 Scaffolds 98,293 bp
Longest Scaffold 236,176 bp
Genome Size 3,972,159 bp
Protein Count 4,194
Coding Density 87.95%
GC Percentage 41.02%
Ambiguous Bases N/A
GTDB representative GCA_000691145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name RIT380_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03753582
Country Puerto Rico
Date 2015-6-19
Genbank Assembly Accession GCA_001029865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source internal stem tissue
Latitude Longitude None
Molecule Count N/A
CDS Count 4,165
Refseq Category na
Seq Rel Date 2015/06/19
Spanned Gaps 0
Species Taxid 293387
SSU Count 4
Submitter Rochester Institute of Technology
Taxid 293387
Total Gap Length 0
Translation Table 11
tRNA Count (total) 87
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDPI00000000.1