Micromonospora aurantiaca
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora aurantiaca
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Micromonospora; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora sp. RV43
NCBI Strain Identifiers RV43
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000145235.1)
Genome Characteristics
CheckM Completeness 99.3%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 378
N50 Contigs 35,354 bp
Longest Contig 253,928 bp
Scaffold Count 376
N50 Scaffolds 35,501 bp
Longest Scaffold 253,928 bp
Genome Size 8,069,233 bp
Protein Count 7,526
Coding Density 89.76%
GC Percentage 72.46%
Ambiguous Bases 23
GTDB representative GCA_000145235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM102951v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03729478
Country Croatia: Rovinj
Date 2015-6-18
Genbank Assembly Accession GCA_001029515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sponge
Latitude Longitude None
Molecule Count N/A
CDS Count 7,399
Refseq Category na
Seq Rel Date 2015/06/18
Spanned Gaps 2
Species Taxid 1661387
SSU Count 3
Submitter University of Wuerzburg
Taxid 1661387
Total Gap Length 144
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEKG00000000.1