Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers BUKK
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 37
N50 Contigs 289,440 bp
Longest Contig 589,995 bp
Scaffold Count 37
N50 Scaffolds 289,440 bp
Longest Scaffold 589,995 bp
Genome Size 2,363,418 bp
Protein Count 2,216
Coding Density 89.53%
GC Percentage 40.41%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102949v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721466
Country Pakistan: Punjab; Bhakkar
Date 2015-6-18
Genbank Assembly Accession GCA_001029495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bone marrow of diseased cattle with haemorrhagic septicaemia
Latitude Longitude 31.63 N 71.07 E
Molecule Count 0
Protein Count 2,207
Refseq Category na
Seq Rel Date 2015/06/18
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter Murdoch University
Taxid 44283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQAO00000000.1