Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers ATTK
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 2
tRNA Count 20
Contig Count 74
N50 Contigs 149,415 bp
Longest Contig 272,711 bp
Scaffold Count 44
N50 Scaffolds 265,021 bp
Longest Scaffold 373,941 bp
Genome Size 2,352,815 bp
Protein Count 2,205
Coding Density 89.51%
GC Percentage 40.35%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM102822v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721557
Country Pakistan: Punjab; Attock
Date 2015-6-15
Genbank Assembly Accession GCA_001028225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bone marrow of diseased cattle with haemorrhagic septicaemia
Latitude Longitude None
Molecule Count 0
Protein Count 2,192
Refseq Category na
Seq Rel Date 2015/06/15
Spanned Gaps 30
Species Taxid 747
SSU Count 5
Submitter Murdoch University
Taxid 44283
Total Gap Length 1566
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQEA00000000.1