Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers Faisal
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.24%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 64
N50 Contigs 107,052 bp
Longest Contig 267,331 bp
Scaffold Count 52
N50 Scaffolds 265,074 bp
Longest Scaffold 374,481 bp
Genome Size 2,358,272 bp
Protein Count 2,211
Coding Density 89.16%
GC Percentage 40.34%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM102820v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721577
Country Pakistan: Punjab; Faisalabad
Date 2015-6-15
Genbank Assembly Accession GCA_001028205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bone marrow of dead buffalo with haemorrhagic septicaemia
Latitude Longitude 31.418 N 73.079 E
Molecule Count 0
Protein Count 2,197
Refseq Category na
Seq Rel Date 2015/06/15
Spanned Gaps 12
Species Taxid 747
SSU Count 6
Submitter Murdoch University
Taxid 44283
Total Gap Length 717
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQEB00000000.1