Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers THF
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 290,056 bp
Longest Contig 594,574 bp
Scaffold Count 28
N50 Scaffolds 290,056 bp
Longest Scaffold 594,574 bp
Genome Size 2,298,035 bp
Protein Count 2,139
Coding Density 89.65%
GC Percentage 40.38%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102782v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721548
Country Thailand: Lamphun; Mueang Lamphun
Date 2015-6-14
Genbank Assembly Accession GCA_001027825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source diseased buffalo with haemorrhagic septicaemia
Latitude Longitude 18.58 N 99.02 E
Molecule Count 0
Protein Count 2,127
Refseq Category na
Seq Rel Date 2015/06/14
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter Murdoch University
Taxid 44283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQAG00000000.1