Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers PVAcc
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 289,467 bp
Longest Contig 647,631 bp
Scaffold Count 38
N50 Scaffolds 289,467 bp
Longest Scaffold 647,631 bp
Genome Size 2,351,970 bp
Protein Count 2,204
Coding Density 89.65%
GC Percentage 40.34%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102766v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721611
Country Pakistan: Khyber Pakhtunkhwa; Peshawar
Date 2015-6-13
Genbank Assembly Accession GCA_001027665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vaccine strain for haemorrhagic septicaemia
Latitude Longitude 34.02 N 71.58 E
Molecule Count 0
Protein Count 2,191
Refseq Category na
Seq Rel Date 2015/06/13
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter Murdoch University
Taxid 44283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQAD00000000.1