Neisseria gonorrhoeae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae; x__Neisseria gonorrhoeae MIA_2011_03-10
NCBI Strain Identifiers MIA_2011_03-10
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003315235.1)
Genome Characteristics
CheckM Completeness 99.3%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 33.33
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 289
N50 Contigs 23,326 bp
Longest Contig 64,364 bp
Scaffold Count 288
N50 Scaffolds 23,326 bp
Longest Scaffold 64,364 bp
Genome Size 2,167,228 bp
Protein Count 2,239
Coding Density 83.93%
GC Percentage 52.42%
Ambiguous Bases N/A
GTDB representative GCA_003315235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM102599v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02338816
Country USA: Miami
Date 2015-6-10
Genbank Assembly Accession GCA_001025995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urinogenital fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,540
Refseq Category na
Seq Rel Date 2015/06/10
Spanned Gaps 1
Species Taxid 485
SSU Count 1
Submitter Read Laboratory, Emory University
Taxid 1351790
Total Gap Length 10
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATQO00000000.1