Diaphorobacter nitroreducens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Diaphorobacter; s__Diaphorobacter nitroreducens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Diaphorobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Diaphorobacter; s__Diaphorobacter sp. J5-51
NCBI Strain Identifiers J5-51
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003755025.1)
Genome Characteristics
CheckM Completeness 94.28%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 141
N50 Contigs 81,231 bp
Longest Contig 283,530 bp
Scaffold Count 141
N50 Scaffolds 81,231 bp
Longest Scaffold 283,530 bp
Genome Size 3,794,153 bp
Protein Count 3,584
Coding Density 89.37%
GC Percentage 66.21%
Ambiguous Bases 74
GTDB representative GCA_003755025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102351v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03165360
Country China: Shaoguan; Guangdong
Date 2015-6-9
Genbank Assembly Accession GCA_001023515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wastewater sludge
Latitude Longitude None
Molecule Count N/A
CDS Count 3,549
Refseq Category na
Seq Rel Date 2015/06/09
Spanned Gaps 0
Species Taxid 680496
SSU Count 1
Submitter Peking University
Taxid 680496
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JSYI00000000.1