Enterobacter roggenkampii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter roggenkampii
NCBI Strain Identifiers GN02692
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001729805.1)
Genome Characteristics
CheckM Completeness 99.07%
CheckM Contamination 0.74%
CheckM Strain Heterogeneity 8.33
5S Count 1
16S Count 3
23S Count 1
tRNA Count 19
Contig Count 111
N50 Contigs 235,117 bp
Longest Contig 809,117 bp
Scaffold Count 111
N50 Scaffolds 235,117 bp
Longest Scaffold 809,117 bp
Genome Size 5,452,155 bp
Protein Count 5,231
Coding Density 89.06%
GC Percentage 55.67%
Ambiguous Bases N/A
GTDB representative GCA_001729805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102275v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03732722
Country USA
Date 2015-06-09
Genbank Assembly Accession GCA_001022755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bodily fluid
Latitude Longitude 36 N 78.9 W
Molecule Count N/A
CDS Count 5,390
Refseq Category na
Seq Rel Date 2015/06/09
Spanned Gaps 0
Species Taxid 1812935
SSU Count 3
Submitter JCVI
Taxid 1812935
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LEDI00000000.1