Enterococcus_E cecorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_E; s__Enterococcus_E cecorum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum
NCBI Strain Identifiers D-104
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000407565.1)
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 151,450 bp
Longest Contig 363,208 bp
Scaffold Count 28
N50 Scaffolds 151,450 bp
Longest Scaffold 363,208 bp
Genome Size 2,275,377 bp
Protein Count 2,223
Coding Density 87.66%
GC Percentage 36.34%
Ambiguous Bases N/A
GTDB representative GCA_000407565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102167v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03699897
Country Poland
Date 2015-6-8
Genbank Assembly Accession GCA_001021675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,216
Refseq Category na
Seq Rel Date 2015/06/08
Spanned Gaps 0
Species Taxid 44008
SSU Count 4
Submitter Warsaw University of Life Sciences (SGGW)
Taxid 44008
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDDZ00000000.1