Marinitoga sp001021165
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Thermotogota; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__Marinitoga sp001021165
Filtered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Thermotogae; c__Thermotogae; o__Petrotogales; f__Petrotogaceae; g__Marinitoga; s__Marinitoga sp. 1155
NCBI Strain Identifiers 1155
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001021165.1)
Genome Characteristics
CheckM Completeness 98.28%
CheckM Contamination 3.45%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 56
N50 Contigs 90,885 bp
Longest Contig 254,999 bp
Scaffold Count 56
N50 Scaffolds 90,885 bp
Longest Scaffold 254,999 bp
Genome Size 2,435,399 bp
Protein Count 2,261
Coding Density 91.18%
GC Percentage 27.30%
Ambiguous Bases 6
GTDB representative GCA_001021165.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM102117v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03764407
Country None
Date 2015-6-7
Genbank Assembly Accession GCA_001021175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,227
Refseq Category na
Seq Rel Date 2015/06/07
Spanned Gaps 0
Species Taxid 1428448
SSU Count 1
Submitter University of Alberta
Taxid 1428448
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZAX00000000.1