Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers FDAARGOS_17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 2.81%
CheckM Strain Heterogeneity 89.47
5S Count 0
16S Count 11
23S Count 12
tRNA Count 20
Contig Count 10
N50 Contigs 1,023,212 bp
Longest Contig 1,362,047 bp
Scaffold Count 10
N50 Scaffolds 1,023,212 bp
Longest Scaffold 1,362,047 bp
Genome Size 2,790,555 bp
Protein Count 2,516
Coding Density 82.30%
GC Percentage 33.03%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101937v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03255456
Country None
Date 2018-01-19
Genbank Assembly Accession GCA_001019375.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vaginal tampon
Latitude Longitude None
Molecule Count N/A
CDS Count 2,771
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 1280
SSU Count 11
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 97
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXZU00000000.2