Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DK-B-USS-084
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 6
23S Count 2
tRNA Count 20
Contig Count 19
N50 Contigs 209,669 bp
Longest Contig 546,545 bp
Scaffold Count 19
N50 Scaffolds 209,669 bp
Longest Scaffold 546,545 bp
Genome Size 2,128,875 bp
Protein Count 2,058
Coding Density 88.77%
GC Percentage 35.61%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101861v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03434995
Country Finland
Date 2015-6-2
Genbank Assembly Accession GCA_001018615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source milk
Latitude Longitude None
Molecule Count N/A
CDS Count 2,115
Refseq Category na
Seq Rel Date 2015/06/02
Spanned Gaps 0
Species Taxid 1311
SSU Count 6
Submitter Novartis Vaccines
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBHH00000000.1