Streptococcus agalactiae
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DE-PW-406
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.89%
CheckM Strain Heterogeneity 92.31
5S Count 2
16S Count 3
23S Count 2
tRNA Count 16
Contig Count 24
N50 Contigs 120,710 bp
Longest Contig 345,443 bp
Scaffold Count 24
N50 Scaffolds 120,710 bp
Longest Scaffold 345,443 bp
Genome Size 2,138,160 bp
Protein Count 2,115
Coding Density 89.27%
GC Percentage 35.25%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101816v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03435022
Country Germany
Date 2015-6-2
Genbank Assembly Accession GCA_001018165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vaginal-rectal
Latitude Longitude None
Molecule Count N/A
CDS Count 2,147
Refseq Category na
Seq Rel Date 2015/06/02
Spanned Gaps 0
Species Taxid 1311
SSU Count 3
Submitter Novartis Vaccines
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBKS00000000.1