Streptococcus agalactiae
Isolate HQ 5S/16S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers ES-PW-068
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 4
23S Count 0
tRNA Count 19
Contig Count 17
N50 Contigs 188,135 bp
Longest Contig 489,518 bp
Scaffold Count 17
N50 Scaffolds 188,135 bp
Longest Scaffold 489,518 bp
Genome Size 2,015,274 bp
Protein Count 2,001
Coding Density 89.23%
GC Percentage 35.20%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101672v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03435043
Country Spain
Date 2015-6-1
Genbank Assembly Accession GCA_001016725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vaginal-rectal
Latitude Longitude None
Molecule Count N/A
CDS Count 2,032
Refseq Category na
Seq Rel Date 2015/06/01
Spanned Gaps 0
Species Taxid 1311
SSU Count 6
Submitter Novartis Vaccines
Taxid 1311
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCVC00000000.1