Paenibacillus etheri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus etheri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus etheri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus etheri
NCBI Strain Identifiers SH7
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.95%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 6
23S Count 9
tRNA Count 20
Contig Count 139
N50 Contigs 146,177 bp
Longest Contig 600,058 bp
Scaffold Count 108
N50 Scaffolds 534,997 bp
Longest Scaffold 893,559 bp
Genome Size 6,634,505 bp
Protein Count 5,997
Coding Density 86.10%
GC Percentage 43.55%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM101282v2
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN03372544
Country Spain: Granada
Date 2015-12-15
Genbank Assembly Accession GCA_001012825.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hydrocarbon contaminated soil
Latitude Longitude 37.183100 N 3.615560 W
Molecule Count N/A
CDS Count 5,920
Refseq Category representative genome
Seq Rel Date 2015/12/15
Spanned Gaps 31
Species Taxid 1306852
SSU Count 11
Submitter Water Research Institute, University of Granada
Taxid 1306852
Total Gap Length 850
Translation Table 11
tRNA Count (total) 92
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LCZJ00000000.2