Clostridium sartagoforme_A
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sartagoforme_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sp. C8
NCBI Strain Identifiers C8
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000401215.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 1.86%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 125
N50 Contigs 59,667 bp
Longest Contig 311,043 bp
Scaffold Count 125
N50 Scaffolds 59,667 bp
Longest Scaffold 311,043 bp
Genome Size 4,020,958 bp
Protein Count 3,716
Coding Density 86.33%
GC Percentage 28.03%
Ambiguous Bases N/A
GTDB representative GCA_000401215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101088v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03571283
Country Viet Nam: Ho Chi Minh City
Date 2015-5-20
Genbank Assembly Accession GCA_001010885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sediment sludge
Latitude Longitude None
Molecule Count N/A
CDS Count 3,646
Refseq Category na
Seq Rel Date 2015/05/20
Spanned Gaps 0
Species Taxid 1667357
SSU Count 6
Submitter Gwangju Institution of Science and Technology
Taxid 1667357
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LBMX00000000.1