Alcanivorax borkumensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Alcanivoracaceae; g__Alcanivorax; s__Alcanivorax borkumensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Alcanivoracaceae; g__Alcanivorax; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Alcanivoracaceae; g__Alcanivorax; s__Alcanivorax sp. NBRC 101098
NCBI Strain Identifiers NBRC 101098
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000009365.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 3,095,417 bp
Longest Contig 3,095,417 bp
Scaffold Count 1
N50 Scaffolds 3,095,417 bp
Longest Scaffold 3,095,417 bp
Genome Size 3,095,417 bp
Protein Count 2,810
Coding Density 87.66%
GC Percentage 54.66%
Ambiguous Bases 2
GTDB representative GCA_000009365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM101050v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00018424
Country None
Date 2014-7-3
Genbank Assembly Accession GCA_001010505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water
Latitude Longitude None
Molecule Count 1
CDS Count 2,761
Refseq Category na
Seq Rel Date 2014/07/03
Spanned Gaps 0
Species Taxid 1113728
SSU Count 3
Submitter National Institute of Technology and Evaluation
Taxid 1113728
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None