Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas pisi
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas pisi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas pisi; x__Xanthomonas pisi DSM 18956
NCBI Strain Identifiers DSM 18956
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_002940045.1)
Genome Characteristics
CheckM Completeness 80.23%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 345
N50 Contigs 66,696 bp
Longest Contig 191,614 bp
Scaffold Count 345
N50 Scaffolds 66,696 bp
Longest Scaffold 191,614 bp
Genome Size 4,253,478 bp
Protein Count 3,639
Coding Density 84.48%
GC Percentage 64.72%
Ambiguous Bases 28
GTDB representative GCA_002940045.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM101041v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02894433
Country Japan
Date 2015-5-19
Genbank Assembly Accession GCA_001010415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf spot
Latitude Longitude None
Molecule Count N/A
CDS Count 3,661
Refseq Category na
Seq Rel Date 2015/05/19
Spanned Gaps 0
Species Taxid 56457
SSU Count 1
Submitter McMaster University
Taxid 1440766
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JPLE00000000.1