Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; sb__Klebsiella pneumoniae subsp. pneumoniae
NCBI Strain Identifiers ST258_FL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 12
N50 Contigs 5,391,203 bp
Longest Contig 5,391,203 bp
Scaffold Count 12
N50 Scaffolds 5,391,203 bp
Longest Scaffold 5,391,203 bp
Genome Size 5,821,835 bp
Protein Count 5,524
Coding Density 87.38%
GC Percentage 57.01%
Ambiguous Bases 17
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM100872v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03435903
Country USA: Orlando
Date 2015-5-18
Genbank Assembly Accession GCA_001008725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude 28.41 N 81.29 W
Molecule Count N/A
CDS Count 5,837
Refseq Category na
Seq Rel Date 2015/05/18
Spanned Gaps 0
Species Taxid 573
SSU Count 8
Submitter New Jersey Medical School-Rutgers University
Taxid 72407
Total Gap Length 0
Translation Table 11
tRNA Count (total) 87
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAKK00000000.1