Haemophilus haemolyticus
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus haemolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus haemolyticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus haemolyticus
NCBI Strain Identifiers 27P25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001679045.1)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.84%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 1
tRNA Count 18
Contig Count 63
N50 Contigs 48,796 bp
Longest Contig 153,135 bp
Scaffold Count 63
N50 Scaffolds 48,796 bp
Longest Scaffold 153,135 bp
Genome Size 1,876,155 bp
Protein Count 1,797
Coding Density 89.86%
GC Percentage 38.20%
Ambiguous Bases N/A
GTDB representative GCA_001679045.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM100827v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03573714
Country USA: NY; Buffalo
Date 2015-5-15
Genbank Assembly Accession GCA_001008275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasopharynx
Latitude Longitude None
Molecule Count N/A
CDS Count 1,797
Refseq Category na
Seq Rel Date 2015/05/15
Spanned Gaps 0
Species Taxid 726
SSU Count 3
Submitter University of Iowa
Taxid 726
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCTH00000000.1