Chlamydophila pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia pneumoniae
NCBI Strain Identifiers CM1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000007205.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 1,229,887 bp
Longest Contig 1,229,887 bp
Scaffold Count 1
N50 Scaffolds 1,229,887 bp
Longest Scaffold 1,229,887 bp
Genome Size 1,229,887 bp
Protein Count 1,059
Coding Density 89.26%
GC Percentage 40.58%
Ambiguous Bases N/A
GTDB representative GCA_000007205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name CM1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3212818
Country USA:Atlanta
Date 2015-5-9
Genbank Assembly Accession GCA_001007125.1
Genome Category Isolate
Genome Representation full
Isolate CM1
Isolation Source host sputum
Latitude Longitude None
Molecule Count 1
CDS Count 1,081
Refseq Category na
Seq Rel Date 2015/05/09
Spanned Gaps 0
Species Taxid 83558
SSU Count 1
Submitter University of Vienna
Taxid 83558
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None