Sphingobacterium kitahiroshimense
Isolate HQ 16S/23S 17 tRNAs
Genome Characteristics
CheckM Completeness 92.84%
CheckM Contamination 2.88%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 344
N50 Contigs 30,842 bp
Longest Contig 87,254 bp
Scaffold Count 344
N50 Scaffolds 30,842 bp
Longest Scaffold 87,254 bp
Genome Size 5,610,811 bp
Protein Count 6,604
Coding Density 84.90%
GC Percentage 36.28%
Ambiguous Bases 0
GTDB representative GCA_012030425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Sphingobacterium 2.0
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN02179235
Country Svalbard: Ny-Alesund
Date 2015-05-11
Genbank Assembly Accession GCA_001006065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source arctic permafrost soil
Latitude Longitude 78.916667 N 11.933333 E
Molecule Count N/A
CDS Count 5,215
Refseq Category na
Seq Rel Date 2015/05/11
Spanned Gaps 0
Species Taxid 1338009
SSU Count 1
Submitter Indian Institute of Technology Kharagpur
Taxid 1338009
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASZT00000000.2