Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
NCBI Strain Identifiers AP1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 1,908,294 bp
Longest Contig 1,908,294 bp
Scaffold Count 1
N50 Scaffolds 1,908,294 bp
Longest Scaffold 1,908,294 bp
Genome Size 1,908,294 bp
Protein Count 1,896
Coding Density 86.12%
GC Percentage 38.47%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM99376v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02716635
Country Czech Republic:Prague
Date 2015-5-7
Genbank Assembly Accession GCA_000993765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 50.088611 N 14.421389 E
Molecule Count 1
CDS Count 1,912
Refseq Category na
Seq Rel Date 2015/05/07
Spanned Gaps 0
Species Taxid 1314
SSU Count 5
Submitter COMBACTE
Taxid 1314
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None