Pseudomonas_E syringae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E syringae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas syringae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas syringae group; x__Pseudomonas syringae group genomosp. 1; s__Pseudomonas syringae; x__Pseudomonas syringae pv. syringae; x__Pseudomonas syringae pv. syringae HS191
NCBI Strain Identifiers HS191
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000507185.2)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 2
N50 Contigs 5,950,211 bp
Longest Contig 5,950,211 bp
Scaffold Count 2
N50 Scaffolds 5,950,211 bp
Longest Scaffold 5,950,211 bp
Genome Size 6,002,759 bp
Protein Count 5,171
Coding Density 88.23%
GC Percentage 58.96%
Ambiguous Bases N/A
GTDB representative GCA_000507185.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM98839v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03267749
Country Australia
Date 2015-5-6
Genbank Assembly Accession GCA_000988395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Diseased vegetative millet
Latitude Longitude 35.3080 S 149.1245 E
Molecule Count 2
CDS Count 5,364
Refseq Category na
Seq Rel Date 2015/05/06
Spanned Gaps 0
Species Taxid 317
SSU Count 5
Submitter Texas A&M University
Taxid 1324932
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None