Corynebacterium striatum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium striatum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium striatum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium striatum
NCBI Strain Identifiers 1961
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000159135.1)
Genome Characteristics
CheckM Completeness 98.49%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 28
N50 Contigs 325,912 bp
Longest Contig 532,574 bp
Scaffold Count 28
N50 Scaffolds 325,912 bp
Longest Scaffold 532,574 bp
Genome Size 2,611,976 bp
Protein Count 2,581
Coding Density 88.64%
GC Percentage 59.40%
Ambiguous Bases 14
GTDB representative GCA_000159135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM98822v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03458462
Country Brazil
Date 2015-5-5
Genbank Assembly Accession GCA_000988225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 2,405
Refseq Category na
Seq Rel Date 2015/05/05
Spanned Gaps 0
Species Taxid 43770
SSU Count 4
Submitter Universidade Federal do Para
Taxid 43770
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAYR00000000.1