Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Paratyphi A
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 98.23%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 9
23S Count 8
tRNA Count 18
Contig Count 244
N50 Contigs 223,012 bp
Longest Contig 312,644 bp
Scaffold Count 53
N50 Scaffolds 2,760,142 bp
Longest Scaffold 2,760,142 bp
Genome Size 4,606,786 bp
Protein Count 4,387
Coding Density 86.35%
GC Percentage 51.83%
Ambiguous Bases 20
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name PA069
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2639582
Country None
Date 2015-4-26
Genbank Assembly Accession GCA_000984175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,597
Refseq Category na
Seq Rel Date 2015/04/26
Spanned Gaps 191
Species Taxid 28901
SSU Count 9
Submitter UNIVERSITY OF WARWICK
Taxid 54388
Total Gap Length 4808
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCTZ00000000.1