Filomicrobium insigne
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Filomicrobium; s__Filomicrobium insigne
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Filomicrobium; s__Candidatus Filomicrobium marinum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Filomicrobium; s__Candidatus Filomicrobium marinum
NCBI Strain Identifiers Y
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900104305.1)
Genome Characteristics
CheckM Completeness 98.25%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 1
N50 Contigs 3,969,942 bp
Longest Contig 3,969,942 bp
Scaffold Count 1
N50 Scaffolds 3,969,942 bp
Longest Scaffold 3,969,942 bp
Genome Size 3,969,942 bp
Protein Count 3,743
Coding Density 87.48%
GC Percentage 57.29%
Ambiguous Bases 6
GTDB representative GCA_900104305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name Y1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3234137
Country Portugal
Date 2015-3-24
Genbank Assembly Accession GCA_000981545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface sewater
Latitude Longitude 41.1822 N 8.7587 W
Molecule Count 1
CDS Count 3,629
Refseq Category na
Seq Rel Date 2015/03/24
Spanned Gaps 0
Species Taxid 1608628
SSU Count 1
Submitter IINFACTS
Taxid 1608628
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None