Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. anaerobius
NCBI Strain Identifiers Mq2T
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 2.81%
CheckM Strain Heterogeneity 70.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 200
N50 Contigs 203,716 bp
Longest Contig 411,650 bp
Scaffold Count 200
N50 Scaffolds 203,716 bp
Longest Scaffold 411,650 bp
Genome Size 2,912,364 bp
Protein Count 2,837
Coding Density 84.42%
GC Percentage 32.84%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM98120v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03352185
Country India: Chandigarh
Date 2015-4-27
Genbank Assembly Accession GCA_000981205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Stool
Latitude Longitude None
Molecule Count N/A
CDS Count 3,079
Refseq Category na
Seq Rel Date 2015/04/27
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter Institute of Microbial Technology
Taxid 72759
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAKI00000000.1