Streptococcus uberis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus uberis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus uberis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus uberis; x__Streptococcus uberis 6780
NCBI Strain Identifiers 6780
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900475595.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 26
N50 Contigs 340,886 bp
Longest Contig 404,720 bp
Scaffold Count 26
N50 Scaffolds 340,886 bp
Longest Scaffold 404,720 bp
Genome Size 1,960,858 bp
Protein Count 1,939
Coding Density 89.86%
GC Percentage 36.48%
Ambiguous Bases N/A
GTDB representative GCA_900475595.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM97540v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02570398
Country None
Date 2015-4-22
Genbank Assembly Accession GCA_000975405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source milk from an udder
Latitude Longitude None
Molecule Count N/A
CDS Count 1,915
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 0
Species Taxid 1349
SSU Count 2
Submitter University of Nottingham
Taxid 1450190
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JATD00000000.1