Pseudomonas_E chengduensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E chengduensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas toyotomiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas toyotomiensis
NCBI Strain Identifiers KF710
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900102635.1)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 419,810 bp
Longest Contig 938,890 bp
Scaffold Count 29
N50 Scaffolds 419,810 bp
Longest Scaffold 938,890 bp
Genome Size 5,596,721 bp
Protein Count 5,170
Coding Density 89.28%
GC Percentage 62.63%
Ambiguous Bases N/A
GTDB representative GCA_900102635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM97462v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00023461
Country None
Date 2015-2-6
Genbank Assembly Accession GCA_000974625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,167
Refseq Category na
Seq Rel Date 2015/02/06
Spanned Gaps 0
Species Taxid 554344
SSU Count 1
Submitter National Institute of Advanced Industrial Science and Technology (AIST)
Taxid 554344
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBQO00000000.1