Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis
NCBI Strain Identifiers ABB07-SB3071
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 18
Contig Count 61
N50 Contigs 161,560 bp
Longest Contig 545,755 bp
Scaffold Count 34
N50 Scaffolds 410,613 bp
Longest Scaffold 681,971 bp
Genome Size 4,701,337 bp
Protein Count 4,428
Coding Density 87.23%
GC Percentage 52.12%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ABB07-SB3071.id12_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03293343
Country Canada: British Columbia; Fraser Valley
Date 2015-4-20
Genbank Assembly Accession GCA_000974045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fecal material
Latitude Longitude None
Molecule Count N/A
CDS Count 4,731
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 27
Species Taxid 28901
SSU Count 1
Submitter McGill University and Genome Quebec Innovation Centre
Taxid 149539
Total Gap Length 2378
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAOU00000000.1