Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 1KSM
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.93%
CheckM Strain Heterogeneity 66.67
5S Count 5
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 34
N50 Contigs 151,235 bp
Longest Contig 534,185 bp
Scaffold Count 34
N50 Scaffolds 151,235 bp
Longest Scaffold 534,185 bp
Genome Size 2,930,706 bp
Protein Count 2,929
Coding Density 90.02%
GC Percentage 37.88%
Ambiguous Bases 8
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM97299v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03365948
Country Austria
Date 2015-4-17
Genbank Assembly Accession GCA_000972995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source food processing environment
Latitude Longitude 48.12 N 16.22 E
Molecule Count N/A
CDS Count 2,962
Refseq Category na
Seq Rel Date 2015/04/17
Spanned Gaps 0
Species Taxid 1639
SSU Count 3
Submitter University of Veterinary Medicine Vienna
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYOH00000000.1