Listeria seeligeri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria seeligeri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria seeligeri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria seeligeri
NCBI Strain Identifiers 7KSM
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000027145.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 19
N50 Contigs 356,901 bp
Longest Contig 535,714 bp
Scaffold Count 19
N50 Scaffolds 356,901 bp
Longest Scaffold 535,714 bp
Genome Size 2,900,634 bp
Protein Count 2,857
Coding Density 89.74%
GC Percentage 37.28%
Ambiguous Bases 8
GTDB representative GCA_000027145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM97298v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03372569
Country Austria
Date 2015-4-17
Genbank Assembly Accession GCA_000972985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source food processing environment
Latitude Longitude 48.12 N 16.22 E
Molecule Count N/A
CDS Count 2,843
Refseq Category na
Seq Rel Date 2015/04/17
Spanned Gaps 0
Species Taxid 1640
SSU Count 5
Submitter University of Veterinary Medicine Vienna
Taxid 1640
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYOM00000000.1