Stenotrophomonas bentonitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers BR12
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.49%
CheckM Contamination 1.17%
CheckM Strain Heterogeneity 12.5
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 380
N50 Contigs 33,277 bp
Longest Contig 170,387 bp
Scaffold Count 80
N50 Scaffolds 92,072 bp
Longest Scaffold 375,308 bp
Genome Size 4,405,362 bp
Protein Count 4,005
Coding Density 88.06%
GC Percentage 66.76%
Ambiguous Bases 0
GTDB representative GCF_002887735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM97233v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03456145
Country France: Paris
Date 2015-4-14
Genbank Assembly Accession GCA_000972335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Intestine
Latitude Longitude None
Molecule Count 0
Protein Count 3,993
Refseq Category na
Seq Rel Date 2015/04/14
Spanned Gaps 300
Species Taxid 40324
SSU Count 1
Submitter Institut Pasteur de Paris
Taxid 40324
Total Gap Length 23269
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LATR00000000.1