Flavobacterium psychrophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
NCBI Strain Identifiers 5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002217405.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,848,308 bp
Longest Contig 2,848,308 bp
Scaffold Count 1
N50 Scaffolds 2,848,408 bp
Longest Scaffold 2,848,408 bp
Genome Size 2,848,408 bp
Protein Count 2,505
Coding Density 86.93%
GC Percentage 32.55%
Ambiguous Bases 288
GTDB representative GCA_002217405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM97157v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02941920
Country Chile
Date 2016-1-27
Genbank Assembly Accession GCA_000971575.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Fish farm freshwater
Latitude Longitude None
Molecule Count 1
CDS Count 2,489
Refseq Category na
Seq Rel Date 2016/01/27
Spanned Gaps 1
Species Taxid 96345
SSU Count 6
Submitter University of Copenhagen
Taxid 96345
Total Gap Length 100
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None