Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers ST-437
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 50.0
5S Count 8
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 235
N50 Contigs 212,845 bp
Longest Contig 446,494 bp
Scaffold Count 233
N50 Scaffolds 212,845 bp
Longest Scaffold 446,494 bp
Genome Size 5,638,095 bp
Protein Count 5,395
Coding Density 87.53%
GC Percentage 57.17%
Ambiguous Bases 7
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM97107v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03451033
Country USA: Connecticut
Date 2015-4-8
Genbank Assembly Accession GCA_000971075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 5,724
Refseq Category na
Seq Rel Date 2015/04/08
Spanned Gaps 2
Species Taxid 573
SSU Count 6
Submitter Centers for Disease Control and Prevention
Taxid 573
Total Gap Length 471
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LART00000000.1